C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box A2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000009827 hoxa2b-001 ENSDARG00000023031 7955 + 16:23011103-23013613 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000009827
Transcript ID Brain Heart Kidney Muscle
ENSDART00000009827 0.415±0.06 0.155±0.06 0.664±0.22 0.249±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014848 Hoxa2-001 protein_coding Mus_musculus 0 316
ENST00000222718 HOXA2-001 protein_coding Homo_sapiens 0 387
ENST00000612779 HOXA2-002 retained_intron Homo_sapiens 0 322

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