C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: islet1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000010896 isl1-001 ENSDARG00000004023 7955 - 5:42353743-42359175 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000010896
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000010896 3.544±1.83 0.049±0.00 0.097±0.06 0.098±0.00 0.349±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JG CIL_0007JG_0003 UCNEbase 5:42183517-42427797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0021522 IGI spinal cord motor neuron differentiation
GO:0031017 IMP exocrine pancreas development
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0048665 IMP neuron fate specification
GO:0048666 IMP neuron development
GO:0048936 IMP peripheral nervous system neuron axonogenesis
GO:0055011 IMP atrial cardiac muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036060 Isl1-001 protein_coding Mus_musculus 0 841
ENSMUST00000176044 Isl1-002 protein_coding Mus_musculus 0 575
ENSMUST00000176444 Isl1-005 retained_intron Mus_musculus 0 494
ENSMUST00000176812 Isl1-004 processed_transcript Mus_musculus 0 390

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