C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ISL1 transcription factor, LIM/homeodomain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176444 Isl1-005 ENSMUSG00000042258 10090 - 13:116299395-116303351 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176444
Transcript ID Adipose Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176444 0.223±0.14 1.060±0.13 0.071±0.00 0.143±0.10 0.097±0.06 0.055±0.00 0.316±0.00 0.389±0.15 0.354±0.00 0.082±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KS CIL_0008KS_0002 VISTA 13:115786721-116388319
CIL_000918 CIL_000918_0002 VISTA 13:115978490-116580024
CIL_0008U0 CIL_0008U0_0002 VISTA 13:116197241-116798253
CIL_000931 CIL_000931_0002 VISTA 13:116214002-116815994
CIL_0009BI CIL_0009BI_0002 VISTA 13:116275049-116876418

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010896 isl1-001 protein_coding Danio_rerio 0 494
ENST00000230658 ISL1-001 protein_coding Homo_sapiens 0 848
ENST00000505475 ISL1-006 processed_transcript Homo_sapiens 0 749
ENST00000511384 ISL1-003 protein_coding Homo_sapiens 0 407

Loading