C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinoid x receptor, alpha b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000016321 rxrab-001 ENSDARG00000035127 7955 - 5:68053454-68088764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000016321
Transcript ID Brain Heart Liver Muscle
ENSDART00000016321 0.310±0.16 0.160±0.10 0.024±0.00 0.036±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044858 Rxrb-001 protein_coding Mus_musculus 0 387
ENSMUST00000116612 Rxrb-003 protein_coding Mus_musculus 0 431
ENSMUST00000173354 Rxrb-002 protein_coding Mus_musculus 0 387
ENSMUST00000174299 Rxrb-010 protein_coding Mus_musculus 0 431
ENSMUST00000174578 Rxrb-009 retained_intron Mus_musculus 0 228

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