C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit a isoform 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000017646 atp6v0a1a-001 ENSDARG00000020847 7955 + 3:16542207-16593106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017646
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017646 2.882±0.23 11.038±1.74 18.890±1.58 1.551±0.00 7.169±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000046 IMP autophagic vacuole fusion
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0001845 IMP phagolysosome assembly
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265686 TCIRG1-001 protein_coding Homo_sapiens 2e-23 115
ENST00000525724 TCIRG1-009 retained_intron Homo_sapiens 2e-23 115
ENST00000528981 TCIRG1-012 nonsense_mediated_decay Homo_sapiens 4e-16 90
ENST00000529364 TCIRG1-014 protein_coding Homo_sapiens 7e-24 115
ENST00000532635 TCIRG1-016 protein_coding Homo_sapiens 2e-23 115
ENST00000533005 TCIRG1-004 retained_intron Homo_sapiens 1e-23 115

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