C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525724 TCIRG1-009 ENSG00000110719 9606 + 11:68043789-68050878 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000525724
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000525724 16.221±0.00 13.326±0.00 10.458±0.00 7.629±0.00 2.622±0.00 5.302±1.38 11.140±0.00 17.722±0.00 15.522±2.37 12.613±4.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001801 Tcirg1-001 protein_coding Mus_musculus 0 1635
ENSMUST00000126070 Tcirg1-002 protein_coding Mus_musculus 0 1635
ENSMUST00000145791 Tcirg1-003 protein_coding Mus_musculus 0 1635
ENSMUST00000131327 Tcirg1-005 retained_intron Mus_musculus 0 867
ENSMUST00000122885 Tcirg1-008 nonsense_mediated_decay Mus_musculus 0 771
ENSMUST00000135070 Tcirg1-004 nonsense_mediated_decay Mus_musculus 0 481
ENSMUST00000162688 Tcirg1-012 retained_intron Mus_musculus 0 246
ENSDART00000017646 atp6v0a1a-001 protein_coding Danio_rerio 2e-23 115
ENSDART00000054119 atp6v0a2a-201 protein_coding Danio_rerio 7e-22 110
ENSDART00000140476 atp6v0a2a-001 protein_coding Danio_rerio 7e-22 110
ENSMUST00000168757 Atp6v0a1-201 protein_coding Mus_musculus 2e-17 95
ENSMUST00000139857 Atp6v0a1-009 processed_transcript Mus_musculus 2e-17 95
ENSMUST00000154896 Atp6v0a1-004 processed_transcript Mus_musculus 2e-17 95
ENSMUST00000092663 Atp6v0a1-003 protein_coding Mus_musculus 2e-17 95
ENSMUST00000103110 Atp6v0a1-002 protein_coding Mus_musculus 2e-17 95
ENSMUST00000044721 Atp6v0a1-001 protein_coding Mus_musculus 2e-17 95

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