C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000019581 arih1-001 ENSDARG00000003616 7955 + 18:18660444-18681728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000019581
Transcript ID Heart Kidney
ENSDART00000019581 2.626±1.06 1.932±0.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026264 Arih1-002 nonsense_mediated_decay Mus_musculus 0 676
ENSMUST00000165322 Arih1-007 protein_coding Mus_musculus 0 1240
ENSMUST00000168456 Arih1-004 retained_intron Mus_musculus 0 497
ENSMUST00000168497 Arih1-006 retained_intron Mus_musculus 0 383
ENSMUST00000168982 Arih1-005 retained_intron Mus_musculus 0 278
ENSMUST00000171856 Arih1-003 nonsense_mediated_decay Mus_musculus 0 387
ENSMUST00000171975 Arih1-001 protein_coding Mus_musculus 0 1347
ENST00000379887 ARIH1-001 protein_coding Homo_sapiens 0 1393
ENST00000561770 ARIH1-006 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000561987 ARIH1-009 retained_intron Homo_sapiens 0 342
ENST00000562891 ARIH1-010 protein_coding Homo_sapiens 0 195
ENST00000564062 ARIH1-003 protein_coding Homo_sapiens 1e-35 154
ENST00000565950 ARIH1-005 retained_intron Homo_sapiens 0 346
ENST00000566063 ARIH1-008 retained_intron Homo_sapiens 0 496
ENST00000567762 ARIH1-004 processed_transcript Homo_sapiens 0.000000000000002 86
ENST00000570085 ARIH1-002 nonsense_mediated_decay Homo_sapiens 5e-35 152

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