C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026264 Arih1-002 ENSMUSG00000025234 10090 - 9:59393113-59486618 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverOvaryPlacentaTestisENSMUST00000026264
Transcript ID Adrenal Brain Colon Liver Ovary Placenta Testis
ENSMUST00000026264 6.343±2.78 5.925±0.00 5.564±1.75 6.015±1.29 17.749±4.64 9.207±2.26 45.176±8.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IPI ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000019581 arih1-001 protein_coding Danio_rerio 0 676
ENST00000379887 ARIH1-001 protein_coding Homo_sapiens 0 1779
ENST00000561770 ARIH1-006 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000561987 ARIH1-009 retained_intron Homo_sapiens 0 494
ENST00000562891 ARIH1-010 protein_coding Homo_sapiens 0 612
ENST00000563310 ARIH1-007 retained_intron Homo_sapiens 0 606
ENST00000564062 ARIH1-003 protein_coding Homo_sapiens 0 667
ENST00000565950 ARIH1-005 retained_intron Homo_sapiens 0 392
ENST00000566063 ARIH1-008 retained_intron Homo_sapiens 0 754
ENST00000567762 ARIH1-004 processed_transcript Homo_sapiens 0 305
ENST00000570085 ARIH1-002 nonsense_mediated_decay Homo_sapiens 0 880

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