C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small G protein signaling modulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000020342 sgsm3-001 ENSDARG00000019038 7955 - 3:33595193-33628281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020342
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020342 22.347±4.28 5.362±2.72 5.201±0.70 0.786±0.00 2.198±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042506 Sgsm3-201 protein_coding Mus_musculus 0 497
ENSMUST00000124845 Sgsm3-002 processed_transcript Mus_musculus 0 497
ENSMUST00000139517 Sgsm3-001 protein_coding Mus_musculus 0 497
ENSMUST00000149345 Sgsm3-010 retained_intron Mus_musculus 0 427
ENSMUST00000154904 Sgsm3-008 protein_coding Mus_musculus 1.4013e-45 187

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