C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small G protein signaling modulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124845 Sgsm3-002 ENSMUSG00000042303 10090 + 15:80977799-81012289 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaENSMUST00000124845
Transcript ID Kidney Liver Ovary Placenta
ENSMUST00000124845 2.463±0.00 1.402±0.06 3.522±1.63 2.684±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W1 CIL_0005W1_0002 CGP 15:80977765-81190757

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000020342 sgsm3-001 protein_coding Danio_rerio 0 497
ENST00000248929 SGSM3-001 protein_coding Homo_sapiens 0 2728
ENST00000417424 SGSM3-012 protein_coding Homo_sapiens 0 224
ENST00000427834 SGSM3-013 protein_coding Homo_sapiens 0 673
ENST00000457767 SGSM3-004 protein_coding Homo_sapiens 0 1092
ENST00000462457 SGSM3-011 retained_intron Homo_sapiens 0 287
ENST00000467915 SGSM3-008 retained_intron Homo_sapiens 0 222
ENST00000469719 SGSM3-010 retained_intron Homo_sapiens 0 357
ENST00000470518 SGSM3-009 retained_intron Homo_sapiens 0 776
ENST00000478085 SGSM3-003 retained_intron Homo_sapiens 0 1264
ENST00000480830 SGSM3-005 retained_intron Homo_sapiens 0 568
ENST00000481028 SGSM3-007 retained_intron Homo_sapiens 0 309
ENST00000481408 SGSM3-006 retained_intron Homo_sapiens 0 671
ENST00000485962 SGSM3-002 retained_intron Homo_sapiens 0 1471

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