C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heart and neural crest derivatives expressed transcript 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000020409 hand2-001 ENSDARG00000008305 7955 - 1:38602513-38604378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020409
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020409 0.114±0.00 94.328±31.18 3.730±1.58 0.143±0.00 0.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007S CIL_00007S_0001 CGP 1:38602513-38770862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003007 IMP heart morphogenesis
GO:0003142 IMP cardiogenic plate morphogenesis
GO:0003144 IMP embryonic heart tube formation
GO:0003342 IMP proepicardium development
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0010002 IMP cardioblast differentiation
GO:0030859 IMP polarized epithelial cell differentiation
GO:0030878 IMP thyroid gland development
GO:0035051 IMP cardiocyte differentiation
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0046983 IEA protein dimerization activity
GO:0048703 IMP embryonic viscerocranium morphogenesis
GO:0060047 IMP heart contraction
GO:0071908 IMP determination of intestine left/right asymmetry

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040104 Hand2-001 protein_coding Mus_musculus 0 263
ENST00000359562 HAND2-001 protein_coding Homo_sapiens 0 276
ENST00000505300 HAND2-003 processed_transcript Homo_sapiens 0 211
ENST00000621866 HAND2-201 protein_coding Homo_sapiens 0 243

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