C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00007S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008305-ENSDARG00000007477 CGP 7955 1:38602513-38770862
GeneTranscriptPositionBiotype
ENSDARG00000007477 (fbxo8)
F-box protein 8 		ENSDART00000015323 (fbxo8-201) 38755409-38770862 protein_coding
ENSDART00000129583 (fbxo8-202) 38754027-38765750 protein_coding
ENSDARG00000008305 (hand2)
heart and neural crest derivatives expressed transcript 2 		ENSDART00000020409 (hand2-001) 38602513-38604378 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00007S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164107-ENSG00000164117 CGP 9606 4:173524969-174284264
GeneTranscriptPositionBiotype
ENSG00000164107 (HAND2)
heart and neural crest derivatives expressed 2 		ENST00000359562 (HAND2-001) 173526091-173530229 protein_coding
ENST00000503024 (HAND2-006) 173524969-173528912 nonsense_mediated_decay
ENST00000505300 (HAND2-003) 173528079-173530206 processed_transcript
ENST00000621866 (HAND2-201) 173526501-173529289 protein_coding
ENSG00000164118 (CEP44)
centrosomal protein 44kDa 		ENST00000296519 (CEP44-201) 174299070-174320331 protein_coding
ENST00000396791 (CEP44-003) 174283905-174332293 nonsense_mediated_decay
ENST00000426172 (CEP44-202) 174299070-174333380 protein_coding
ENST00000457424 (CEP44-002) 174283904-174333380 protein_coding
ENST00000503053 (CEP44-008) 174284018-174304280 protein_coding
ENST00000503780 (CEP44-001) 174283677-174320330 protein_coding
ENST00000505124 (CEP44-007) 174283730-174303801 protein_coding
ENST00000508483 (CEP44-004) 174308800-174316686 retained_intron
ENST00000514712 (CEP44-005) 174283923-174303802 protein_coding
ENST00000515299 (CEP44-006) 174283969-174308775 protein_coding
ENSG00000213370 (RANP6)
RAN, member RAS oncogene family pseudogene 6 		ENST00000413691 (RANP6-001) 173633728-173634371 processed_pseudogene
ENSG00000234801 (MORF4)
mortality factor 4 		ENST00000447135 (MORF4-001) 173615936-173616906 processed_pseudogene
ENSG00000248174 (RP11-148L24.1)
 ENST00000503140 (RP11-148L24.1-002) 174097755-174120517 lincRNA
ENST00000515444 (RP11-148L24.1-001) 174094660-174220398 lincRNA
ENSG00000250043 (RP11-161D15.2)
 ENST00000502956 (RP11-161D15.2-001) 173896394-173911895 lincRNA
ENST00000515825 (RP11-161D15.2-002) 173877471-173913252 lincRNA
ENSG00000250708 (RP11-161D15.1)
 ENST00000509968 (RP11-161D15.1-002) 173897252-173929431 lincRNA
ENST00000512263 (RP11-161D15.1-001) 173897273-173929525 lincRNA
ENSG00000250957 (RP11-248N22.1)
 ENST00000511346 (RP11-248N22.1-001) 174135055-174154637 lincRNA
ENSG00000251213 (RP11-248N22.2)
 ENST00000504167 (RP11-248N22.2-001) 174164441-174168913 lincRNA
ENSG00000251216 (RP11-161D15.3)
 ENST00000503325 (RP11-161D15.3-002) 173982619-173990861 lincRNA
ENST00000511291 (RP11-161D15.3-001) 173924207-173990851 lincRNA
ENSG00000261672 (RP11-475B2.1)
 ENST00000561655 (RP11-475B2.1-001) 173593672-173594556 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007S_0001ENSDARG00000007477ENSDART00000015323ENSDART00000129583ENSDARG00000008305ENSDART00000020409CIL_00007S_0002ENSG00000164107ENST00000359562ENST00000503024ENST00000505300ENST00000621866ENSG00000164118ENST00000296519ENST00000396791ENST00000426172ENST00000457424ENST00000503053ENST00000503780ENST00000505124ENST00000508483ENST00000514712ENST00000515299ENSG00000213370ENST00000413691ENSG00000234801ENST00000447135ENSG00000248174ENST00000503140ENST00000515444ENSG00000250043ENST00000502956ENST00000515825ENSG00000250708ENST00000509968ENST00000512263ENSG00000250957ENST00000511346ENSG00000251213ENST00000504167ENSG00000251216ENST00000503325ENST00000511291ENSG00000261672ENST00000561655
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007S_0001ENSDARG00000007477ENSDART00000015323ENSDART00000129583ENSDARG00000008305ENSDART00000020409CIL_00007S_0002ENSG00000164107ENST00000359562ENST00000621866ENSG00000164118ENST00000296519ENST00000426172ENST00000457424ENST00000503780ENST00000515299ENSG00000213370ENST00000413691ENSG00000234801ENST00000447135ENSG00000248174ENST00000503140ENST00000515444ENSG00000250043ENST00000502956ENST00000515825ENSG00000250708ENST00000509968ENST00000512263ENSG00000250957ENST00000511346ENSG00000251213ENST00000504167ENSG00000251216ENST00000503325ENST00000511291ENSG00000261672ENST00000561655
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007477 ENSDART00000015323 N/A N/A N/A 3.650±1.53 N/A N/A 5.433±2.09 1.658±0.00 0.194±0.00 N/A 3.472±0.00 N/A N/A N/A
ENSDART00000129583 N/A N/A N/A 4.470±1.30 N/A N/A 13.921±10.41 2.923±1.48 0.104±0.00 N/A 0.551±0.00 N/A N/A N/A
ENSDARG00000008305 ENSDART00000020409 N/A N/A N/A 0.114±0.00 N/A N/A 94.328±31.18 3.730±1.58 0.143±0.00 N/A 0.104±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164107 ENST00000359562 0.333±0.00 N/A N/A N/A 0.641±0.00 41.808±0.00 13.836±7.37 0.693±0.64 3.361±2.15 N/A N/A 5.376±2.90 14.338±7.46 1.533±1.25
ENST00000503024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621866 N/A 0.448±0.00 N/A N/A 1.018±0.00 1.653±0.00 N/A N/A 2.561±0.00 0.483±0.00 0.095±0.00 7.886±6.35 29.715±15.35 N/A
ENSG00000164118 ENST00000296519 N/A 0.627±0.00 N/A 0.491±0.00 1.065±0.19 0.918±0.00 0.842±0.00 1.382±0.00 1.364±0.00 N/A N/A 1.471±0.36 N/A 1.889±0.00
ENST00000396791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.288±0.01 N/A N/A N/A
ENST00000457424 N/A N/A N/A 0.610±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.003±2.06
ENST00000503053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503780 N/A N/A N/A 0.667±0.00 N/A 1.173±0.49 N/A 0.747±0.00 0.478±0.00 0.795±0.00 N/A 0.818±0.26 0.542±0.00 N/A
ENST00000505124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515299 N/A N/A N/A N/A N/A N/A N/A 2.506±0.00 N/A N/A 0.540±0.00 N/A N/A N/A
ENSG00000213370 ENST00000413691 0.020±0.00 N/A N/A 0.042±0.00 0.041±0.00 0.038±0.00 0.019±0.00 N/A 0.036±0.00 0.018±0.00 0.036±0.00 N/A N/A N/A
ENSG00000234801 ENST00000447135 0.084±0.00 0.037±0.00 N/A 0.104±0.08 0.132±0.00 0.034±0.00 0.011±0.00 0.207±0.00 0.022±0.00 0.011±0.00 0.152±0.00 0.076±0.00 0.039±0.00 0.056±0.00
ENSG00000248174 ENST00000503140 N/A N/A N/A 0.059±0.00 N/A 0.767±0.55 0.138±0.00 0.057±0.00 N/A N/A N/A 0.223±0.18 0.111±0.04 0.166±0.07
ENST00000515444 0.049±0.00 0.069±0.00 N/A 0.106±0.01 0.068±0.00 0.035±0.00 N/A 0.058±0.00 0.547±0.47 0.008±0.00 N/A 0.098±0.08 0.076±0.04 0.047±0.00
ENSG00000250043 ENST00000502956 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A 0.028±0.00 0.129±0.10
ENST00000515825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.126±0.01
ENSG00000250708 ENST00000509968 N/A N/A N/A 0.093±0.00 N/A 0.084±0.00 N/A N/A N/A N/A N/A 0.203±0.00 N/A 1.462±1.34
ENST00000512263 N/A N/A N/A N/A N/A 0.153±0.00 0.792±0.00 N/A N/A 0.470±0.00 N/A 0.585±0.17 N/A 0.929±0.00
ENSG00000250957 ENST00000511346 N/A N/A N/A N/A N/A 0.282±0.00 0.053±0.00 N/A 0.055±0.00 N/A N/A 0.191±0.00 0.054±0.02 0.072±0.00
ENSG00000251213 ENST00000504167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A
ENSG00000251216 ENST00000503325 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511291 N/A N/A N/A 0.006±0.00 N/A 0.056±0.00 0.146±0.08 N/A 0.005±0.00 0.013±0.01 N/A 0.032±0.00 0.119±0.06 0.284±0.23
ENSG00000261672 ENST00000561655 N/A N/A N/A N/A 0.078±0.00 0.611±0.00 0.117±0.08 0.346±0.00 0.099±0.00 N/A N/A 0.537±0.15 0.256±0.12 0.162±0.13

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