C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: developing brain homeobox 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000022441 dbx1a-201 ENSDARG00000086393 7955 - 7:17799842-17803249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000022441
Transcript ID Brain Heart Muscle
ENSDART00000022441 0.389±0.09 0.052±0.00 0.561±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AW CIL_0004AW_0001 CGP 7:17581711-17803249
CIL_0004AP CIL_0004AP_0001 CGP 7:17799842-17878421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0021515 IGI cell differentiation in spinal cord
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052650 Hoxb8-001 protein_coding Mus_musculus 0.000000006 68
ENSMUST00000168043 Hoxb8-201 protein_coding Mus_musculus 0.000000003 68

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