C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal, V0 subunit c, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000023859 atp6v0ca-002 ENSDARG00000057853 7955 - 3:15664661-15675444 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000023859
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000023859 213.163±171.88 78.759±26.16 97.321±24.23 15.075±0.00 61.633±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001878 IDA response to yeast
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0060036 IMP notochord cell vacuolation
GO:0060041 IMP retina development in camera-type eye
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024932 Atp6v0c-001 protein_coding Mus_musculus 0 344
ENSMUST00000098862 Atp6v0c-003 protein_coding Mus_musculus 0 344
ENSMUST00000122373 Gm15487-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000148541 Atp6v0c-004 protein_coding Mus_musculus 0 331
ENSMUST00000150647 Atp6v0c-005 protein_coding Mus_musculus 0 196
ENSMUST00000151061 Atp6v0c-002 processed_transcript Mus_musculus 0 315
ENSMUST00000156061 Atp6v0c-006 processed_transcript Mus_musculus 0 196

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