C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 4A, genome duplicate b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024302 kdm4ab-201 ENSDARG00000019103 7955 - 2:17284549-17313945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024302
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024302 3.514±2.80 5.810±0.00 0.360±0.00 0.642±0.00 2.317±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F2 CIL_0002F2_0001 CGP 2:17085994-17313945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381306 KDM4C-002 protein_coding Homo_sapiens 0 442
ENST00000381309 KDM4C-001 protein_coding Homo_sapiens 0 442
ENST00000401787 KDM4C-010 protein_coding Homo_sapiens 7e-31 139
ENST00000438023 KDM4C-011 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000480996 KDM4C-004 processed_transcript Homo_sapiens 9e-30 134
ENST00000489243 KDM4C-003 processed_transcript Homo_sapiens 0 377
ENST00000535193 KDM4C-201 protein_coding Homo_sapiens 0 442
ENST00000536108 KDM4C-001 protein_coding Homo_sapiens 0 442
ENST00000543771 KDM4C-014 protein_coding Homo_sapiens 0 442

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