C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLI-Kruppel family member GLI2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024555 gli2a-001 ENSDARG00000025641 7955 + 9:38194145-38349217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024555
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024555 0.459±0.14 0.616±0.32 0.361±0.04 0.024±0.00 0.242±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0007399 IMP nervous system development
GO:0007411 IMP axon guidance
GO:0007420 IMP brain development
GO:0007517 IMP muscle organ development
GO:0008015 IMP blood circulation
GO:0008045 IMP motor neuron axon guidance
GO:0009953 IMP dorsal/ventral pattern formation
GO:0021508 IMP floor plate formation
GO:0021523 IMP somatic motor neuron differentiation
GO:0021634 IMP optic nerve formation
GO:0021953 IMP central nervous system neuron differentiation
GO:0021983 IMP pituitary gland development
GO:0021984 IMP adenohypophysis development
GO:0031018 IMP endocrine pancreas development
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0031513 IDA nonmotile primary cilium
GO:0032835 IMP glomerulus development
GO:0042476 IMP odontogenesis
GO:0042694 IMP muscle cell fate specification
GO:0046872 IEA metal ion binding
GO:0048557 IMP embryonic digestive tract morphogenesis
GO:0048618 IMP post-embryonic foregut morphogenesis
GO:0048855 IMP adenohypophysis morphogenesis
GO:0050767 IGI regulation of neurogenesis
GO:0055002 IMP striated muscle cell development
GO:0070935 IGI 3'-UTR-mediated mRNA stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361492 GLI2-202 protein_coding Homo_sapiens 0 353
ENST00000433812 GLI2-011 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000435313 GLI2-008 processed_transcript Homo_sapiens 0 784
ENST00000452319 GLI2-009 protein_coding Homo_sapiens 0 353
ENST00000472722 GLI2-015 retained_intron Homo_sapiens 3.00018e-42 176
ENST00000482119 GLI2-014 processed_transcript Homo_sapiens 1.99965e-42 176

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