C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLI family zinc finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435313 GLI2-008 ENSG00000074047 9606 + 2:120797296-120986435 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverOvaryPlacentaTestisENST00000435313
Transcript ID Bladder Breast Colon Liver Ovary Placenta Testis
ENST00000435313 0.397±0.00 1.049±0.00 0.351±0.00 0.986±0.00 1.268±0.00 0.427±0.19 0.526±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081M CIL_00081M_0001 VISTA 2:120504710-121107153
CIL_00081M CIL_00081M_0002 VISTA 2:120507154-121108132

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062483 Gli2-001 protein_coding Mus_musculus 0 2266
ENSMUST00000161301 Gli2-002 protein_coding Mus_musculus 0 1182
ENSMUST00000160991 Gli2-006 nonsense_mediated_decay Mus_musculus 0 1085
ENSMUST00000162607 Gli2-008 protein_coding Mus_musculus 0 837
ENSMUST00000161056 Gli2-005 nonsense_mediated_decay Mus_musculus 0 837
ENSDART00000024555 gli2a-001 protein_coding Danio_rerio 0 784
ENSMUST00000161451 Gli2-004 protein_coding Mus_musculus 0 643
ENSMUST00000159839 Gli2-007 nonsense_mediated_decay Mus_musculus 0 643
ENSDART00000017912 gli2b-201 protein_coding Danio_rerio 0 617
ENSDART00000123101 gli1-202 protein_coding Danio_rerio 0 405
ENSDART00000049151 gli1-201 protein_coding Danio_rerio 0 405
ENSMUST00000162552 Gli2-003 nonsense_mediated_decay Mus_musculus 0 394

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