C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: orthopedia homolog a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000027268 otpa-001 ENSDARG00000014201 7955 + 21:7521820-7526406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027268
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027268 8.871±3.65 0.036±0.00 0.171±0.04 0.022±0.00 0.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OX CIL_0007OX_0004 UCNEbase 21:7446038-7542480
CIL_00023D CIL_00023D_0001 CGP 21:7484927-7526406
CIL_000239 CIL_000239_0001 CGP 21:7521742-7569956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007632 IMP visual behavior
GO:0021884 IMP forebrain neuron development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022195 Otp-001 protein_coding Mus_musculus 0 575
ENSMUST00000184985 Otp-002 processed_transcript Mus_musculus 0 375
ENST00000306422 OTP-001 protein_coding Homo_sapiens 0.000000002 69

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