C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein R
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000027864 hnrnpr-201 ENSDARG00000014569 7955 + 19:40444-48614 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000027864
Transcript ID Brain Heart Kidney Muscle
ENSDART00000027864 14.869±9.28 8.733±4.54 5.133±0.00 3.383±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IDA mRNA binding
GO:0019012 IEA virion
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex
GO:0048846 IMP axon extension involved in axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084219 Hnrnpr-007 protein_coding Mus_musculus 0 209
ENSMUST00000105850 Hnrnpr-002 protein_coding Mus_musculus 0 233
ENSMUST00000125696 Hnrnpr-005 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000131671 Hnrnpr-003 protein_coding Mus_musculus 0 233
ENSMUST00000134524 Hnrnpr-006 protein_coding Mus_musculus 0 233
ENSMUST00000145282 Hnrnpr-008 nonsense_mediated_decay Mus_musculus 0 209
ENSMUST00000148843 Hnrnpr-001 protein_coding Mus_musculus 0 233

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