C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein R
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105850 Hnrnpr-002 ENSMUSG00000066037 10090 + 4:136310968-136340681 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105850
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105850 4.178±1.62 1.053±0.00 8.167±0.67 24.293±1.59 2.253±0.61 1.729±0.87 3.241±0.32 3.007±0.44 8.206±7.39 4.524±0.48 2.788±0.56 5.825±2.98 9.011±2.99 4.797±1.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IDA nucleus
GO:0019013 IEA viral nucleocapsid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000027864 hnrnpr-201 protein_coding Danio_rerio 0 233
ENST00000302271 HNRNPR-001 protein_coding Homo_sapiens 0 3884
ENST00000374612 HNRNPR-003 protein_coding Homo_sapiens 0 3958
ENST00000374616 HNRNPR-002 protein_coding Homo_sapiens 0 3925
ENST00000427764 HNRNPR-201 protein_coding Homo_sapiens 0 2134
ENST00000453465 HNRNPRP1-001 processed_pseudogene Homo_sapiens 0 1884
ENST00000463552 HNRNPR-010 processed_transcript Homo_sapiens 0 935
ENST00000470941 HNRNPR-009 processed_transcript Homo_sapiens 0 688
ENST00000476451 HNRNPR-008 processed_transcript Homo_sapiens 0 1035
ENST00000476660 HNRNPR-005 processed_transcript Homo_sapiens 0 2126
ENST00000478691 HNRNPR-004 protein_coding Homo_sapiens 0 3474
ENST00000490652 HNRNPR-007 processed_transcript Homo_sapiens 0 619
ENST00000606561 HNRNPR-011 protein_coding Homo_sapiens 0 2289

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