C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lunatic fringe homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000028673 lfng-001 ENSDARG00000037879 7955 + 3:41912281-41921651 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000028673
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000028673 5.718±3.71 22.349±7.04 1.546±0.00 0.375±0.00 7.737±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027L CIL_00027L_0001 CGP 3:41780643-41921651
CIL_000558 CIL_000558_0001 CGP 3:41912281-42081359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0007219 IEA Notch signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0007389 IEA pattern specification process
GO:0007399 IEA nervous system development
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030154 IEA cell differentiation
GO:0030173 IEA integral to Golgi membrane
GO:0033829 IEA O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0045665 IMP negative regulation of neuron differentiation
GO:0046872 IEA metal ion binding
GO:0055016 IMP hypochord development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031555 Lfng-201 protein_coding Mus_musculus 0 333

Loading