C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00027L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000033382-ENSDARG00000037879 CGP 7955 3:41780643-41921651
GeneTranscriptPositionBiotype
ENSDARG00000033382 (grifin)
galectin related inter-fiber protein
ENSDART00000049687 (grifin-001) 41780643-41785960 protein_coding
ENSDARG00000037879 (lfng)
lunatic fringe homolog
ENSDART00000028673 (lfng-001) 41912281-41921651 protein_coding
ENSDART00000138280 (lfng-002) 41916896-41917830 protein_coding
CIL_00027L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000275572-ENSG00000106003 CGP 9606 7:2474844-2529177
GeneTranscriptPositionBiotype
ENSG00000106003 (LFNG)
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
ENST00000222725 (LFNG-001) 2519842-2528429 protein_coding
ENST00000338732 (LFNG-201) 2518554-2528427 protein_coding
ENST00000359574 (LFNG-002) 2519862-2529177 protein_coding
ENST00000402045 (LFNG-004) 2517863-2528429 protein_coding
ENST00000402506 (LFNG-003) 2512529-2528427 protein_coding
ENST00000493850 (LFNG-005) 2523593-2526871 retained_intron
ENST00000614382 (LFNG-202) 2524648-2528427 protein_coding
ENSG00000275572 (GRIFIN)
galectin-related inter-fiber protein
ENST00000611693 (GRIFIN-002) 2475430-2476894 retained_intron
ENST00000614228 (GRIFIN-001) 2474844-2476383 protein_coding
CIL_00027L_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036586-ENSMUSG00000029570 CGP 10090 5:140563119-140615543
GeneTranscriptPositionBiotype
ENSMUSG00000029570 (Lfng)
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
ENSMUST00000031555 (Lfng-201) 140607341-140615543 protein_coding
ENSMUSG00000036586 (Grifin)
galectin-related inter-fiber protein
ENSMUST00000042993 (Grifin-001) 140563119-140565071 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027L_0001ENSDARG00000033382ENSDART00000049687ENSDARG00000037879ENSDART00000028673ENSDART00000138280CIL_00027L_0002ENSG00000106003ENST00000222725ENST00000338732ENST00000359574ENST00000402045ENST00000402506ENST00000493850ENST00000614382ENSG00000275572ENST00000611693ENST00000614228CIL_00027L_0003ENSMUSG00000029570ENSMUST00000031555ENSMUSG00000036586ENSMUST00000042993
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027L_0001ENSDARG00000033382ENSDART00000049687ENSDARG00000037879ENSDART00000028673CIL_00027L_0002ENSG00000106003ENST00000222725ENST00000338732ENST00000359574ENST00000493850ENST00000614382ENSG00000275572ENST00000611693ENST00000614228CIL_00027L_0003ENSMUSG00000029570ENSMUST00000031555ENSMUSG00000036586ENSMUST00000042993
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033382 ENSDART00000049687 N/A N/A N/A 0.343±0.18 N/A N/A 0.127±0.00 0.146±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000037879 ENSDART00000028673 N/A N/A N/A 5.718±3.71 N/A N/A 22.349±7.04 1.546±0.00 0.375±0.00 N/A 7.737±0.00 N/A N/A N/A
ENSDART00000138280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106003 ENST00000222725 1.177±0.00 N/A N/A 1.681±0.00 2.571±2.07 1.908±0.00 1.702±0.00 1.564±0.00 1.102±0.45 3.337±2.85 0.518±0.00 4.329±3.38 2.983±1.69 0.615±0.00
ENST00000338732 N/A N/A N/A N/A N/A 1.945±0.00 N/A 0.731±0.00 N/A N/A 0.131±0.00 7.420±0.00 7.148±1.43 N/A
ENST00000359574 N/A N/A 0.373±0.00 N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000402045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493850 N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A 0.424±0.00 N/A N/A N/A
ENST00000614382 0.502±0.00 7.702±0.00 N/A 1.975±0.00 10.433±0.00 1.982±0.00 N/A 1.373±0.00 0.184±0.00 N/A 0.145±0.04 1.158±0.00 N/A 2.866±0.99
ENSG00000275572 ENST00000611693 N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A 0.121±0.00 N/A N/A
ENST00000614228 N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029570 ENSMUST00000031555 31.297±3.73 20.412±2.21 9.944±1.48 12.885±7.53 71.840±34.82 22.679±1.67 6.033±1.25 11.058±0.84 6.525±3.88 47.611±12.43 1.580±0.66 17.011±7.71 1.396±0.73 0.462±0.24
ENSMUSG00000036586 ENSMUST00000042993 0.093±0.04 N/A N/A 0.107±0.01 0.113±0.02 N/A N/A 0.060±0.00 1.944±1.30 N/A N/A 0.260±0.14 0.164±0.00 N/A

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