C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: short stature homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000029238 shox-201 ENSDARG00000025891 7955 + 9:35612655-35621451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000029238
Transcript ID Brain Heart Kidney Muscle
ENSDART00000029238 13.485±4.51 0.096±0.06 0.132±0.03 0.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027Q CIL_00027Q_0001 CGP 9:35455758-35621451
CIL_0007KJ CIL_0007KJ_0004 UCNEbase 9:35531966-35679719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

No Homologs available.

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