C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIBa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000033848 brf1a-201 ENSDARG00000017835 7955 + 13:33592119-33672542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000033848
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000033848 2.520±0.46 1.296±0.35 2.111±0.42 1.888±0.00 0.813±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IK CIL_0005IK_0002 CGP 13:33592105-33672542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003743 IEA translation initiation factor activity
GO:0005634 IEA nucleus
GO:0006352 IEA DNA-dependent transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006412 IEA translation
GO:0006413 IEA translational initiation
GO:0008270 IEA zinc ion binding
GO:0017025 IEA TBP-class protein binding
GO:0045893 IEA positive regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072634 Aplp2-201 protein_coding Mus_musculus 0.000001 60
ENSMUST00000079758 Aplp2-202 protein_coding Mus_musculus 0.000001 60

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