C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor-like protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079758 Aplp2-202 ENSMUSG00000031996 10090 - 9:31149557-31211815 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079758
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079758 63.039±21.38 128.234±38.78 33.907±0.51 45.356±26.70 59.456±11.43 23.959±11.30 25.744±1.28 48.762±19.42 17.522±2.87 45.639±3.14 6.704±0.48 126.638±42.07 19.660±6.12 15.450±1.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IGI suckling behavior
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006878 IMP cellular copper ion homeostasis
GO:0007176 IGI regulation of epidermal growth factor-activated receptor activity
GO:0007617 IGI mating behavior
GO:0007626 IGI locomotory behavior
GO:0008201 IEA heparin binding
GO:0008203 IGI cholesterol metabolic process
GO:0016021 IEA integral component of membrane
GO:0030198 IGI extracellular matrix organization
GO:0030900 IGI forebrain development
GO:0030901 IGI midbrain development
GO:0043393 IGI regulation of protein binding
GO:0046914 IEA transition metal ion binding
GO:0050885 IGI neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000077125 aplp2-001 protein_coding Danio_rerio 0 316
ENSDART00000033848 brf1a-201 protein_coding Danio_rerio 0.000001 60
ENST00000263574 APLP2-005 protein_coding Homo_sapiens 0 1801
ENST00000278756 APLP2-008 protein_coding Homo_sapiens 0 952
ENST00000338167 APLP2-001 protein_coding Homo_sapiens 0 1070
ENST00000345598 APLP2-002 protein_coding Homo_sapiens 0 939
ENST00000525604 APLP2-026 retained_intron Homo_sapiens 0 586
ENST00000526330 APLP2-022 processed_transcript Homo_sapiens 0 411
ENST00000527702 APLP2-020 processed_transcript Homo_sapiens 0 453
ENST00000528499 APLP2-003 protein_coding Homo_sapiens 0 2006
ENST00000529235 APLP2-028 processed_transcript Homo_sapiens 0 525
ENST00000529483 APLP2-030 processed_transcript Homo_sapiens 0 248
ENST00000529701 APLP2-021 processed_transcript Homo_sapiens 0 313
ENST00000530132 APLP2-010 nonsense_mediated_decay Homo_sapiens 9e-26 121
ENST00000530493 APLP2-025 retained_intron Homo_sapiens 0 453
ENST00000532456 APLP2-029 processed_transcript Homo_sapiens 1e-25 121
ENST00000533195 APLP2-011 protein_coding Homo_sapiens 1e-25 121
ENST00000533532 APLP2-014 retained_intron Homo_sapiens 0 342
ENST00000533616 APLP2-009 nonsense_mediated_decay Homo_sapiens 0 2189
ENST00000533618 APLP2-015 retained_intron Homo_sapiens 0 523
ENST00000533713 APLP2-027 protein_coding Homo_sapiens 0 525
ENST00000533860 APLP2-024 retained_intron Homo_sapiens 0 588
ENST00000534001 APLP2-031 processed_transcript Homo_sapiens 0 529
ENST00000534582 APLP2-018 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000534761 APLP2-023 processed_transcript Homo_sapiens 0 381

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