C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000034078 psmc4-001 ENSDARG00000027099 7955 - 16:44564175-44574700 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000034078
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000034078 26.713±19.89 21.279±14.82 13.446±14.29 5.870±0.00 37.685±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000502 IEA proteasome complex
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016787 IEA hydrolase activity
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity
GO:0030163 IEA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000157812 PSMC4-001 protein_coding Homo_sapiens 0 1110
ENST00000455878 PSMC4-002 protein_coding Homo_sapiens 0 977
ENST00000593455 PSMC4-003 retained_intron Homo_sapiens 0 815
ENST00000596386 PSMC4-006 retained_intron Homo_sapiens 0 741
ENST00000601697 PSMC4-004 retained_intron Homo_sapiens 0 928

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