C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000041895 ssu72-001 ENSDARG00000031216 7955 + 22:380330-388626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000041895
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000041895 13.687±12.09 26.433±3.36 4.976±0.00 6.796±0.00 19.565±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030905 Ssu72-001 protein_coding Mus_musculus 0 444
ENSMUST00000178987 1500002C15Rik-001 protein_coding Mus_musculus 0.000000000000001 90
ENST00000291386 SSU72-001 protein_coding Homo_sapiens 0 435
ENST00000378726 SSU72-002 retained_intron Homo_sapiens 0 263

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