C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 123
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000044429 rnf123-201 ENSDARG00000031269 7955 - 22:37201649-37423864 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000044429
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000044429 1.405±0.45 1.004±0.50 0.148±0.01 0.020±0.00 0.888±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NE CIL_0005NE_0001 CGP 22:37201649-37423864

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327697 RNF123-001 protein_coding Homo_sapiens 0 957
ENST00000433785 RNF123-007 protein_coding Homo_sapiens 0 540
ENST00000444689 RNF123-012 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000457726 RNF123-003 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000469978 RNF123-011 retained_intron Homo_sapiens 0 361
ENST00000486102 RNF123-005 retained_intron Homo_sapiens 0 296
ENST00000487805 RNF123-006 retained_intron Homo_sapiens 0 540

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