C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, rho 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000048430 gabrr3a-001 ENSDARG00000027153 7955 - 10:36391160-36433956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000048430
Transcript ID Brain Heart Kidney Muscle
ENSDART00000048430 0.099±0.04 2.206±0.80 0.095±0.00 0.040±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029947 Gabrr1-001 protein_coding Mus_musculus 0 501
ENST00000369451 GABRR1-003 protein_coding Homo_sapiens 0 429
ENST00000435811 GABRR1-201 protein_coding Homo_sapiens 0 429
ENST00000454853 GABRR1-001 protein_coding Homo_sapiens 0 429
ENST00000457434 GABRR1-002 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000611484 GABRR1-202 protein_coding Homo_sapiens 0 429
ENST00000621627 GABRR1-203 protein_coding Homo_sapiens 0 429

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