C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 10b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000052444 pcdh10b-201 ENSDARG00000036121 7955 - 14:45217205-45365436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052444
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052444 14.255±12.62 0.149±0.08 0.728±0.07 0.042±0.00 1.071±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0021794 IMP thalamus development
GO:0048339 IMP paraxial mesoderm development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166126 Pcdh10-201 protein_coding Mus_musculus 0 420
ENSMUST00000170695 Pcdh10-202 protein_coding Mus_musculus 0 420
ENSMUST00000171554 Pcdh10-203 protein_coding Mus_musculus 0 420

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