C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 2Ba
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000053158 kdm2ba-201 ENSDARG00000036593 7955 - 8:42291602-42314330 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053158
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053158 14.172±7.70 2.290±1.33 1.167±0.00 0.591±0.00 1.892±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G5 CIL_0007G5_0001 CGP 8:42291602-42331764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377069 KDM2B-005 protein_coding Homo_sapiens 0 272
ENST00000377071 KDM2B-001 protein_coding Homo_sapiens 0 272
ENST00000536437 KDM2B-201 protein_coding Homo_sapiens 0 204
ENST00000538243 KDM2B-013 retained_intron Homo_sapiens 0 272
ENST00000538503 KDM2B-020 retained_intron Homo_sapiens 0 207
ENST00000542973 KDM2B-022 protein_coding Homo_sapiens 0 272

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