C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: profilin 2 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000053426 pfn2l-001 ENSDARG00000012682 7955 + 2:9936000-9940736 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053426
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053426 85.371±20.40 27.637±16.00 17.368±11.23 3.004±0.00 17.269±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0030036 IEA actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066882 Pfn2-001 protein_coding Mus_musculus 0 311
ENSMUST00000119344 Pfn2-002 protein_coding Mus_musculus 0 237
ENSMUST00000122210 Pfn2-004 protein_coding Mus_musculus 0 237
ENST00000239940 PFN2-001 protein_coding Homo_sapiens 0 327
ENST00000475518 PFN2-015 protein_coding Homo_sapiens 0 248
ENST00000481275 PFN2-016 protein_coding Homo_sapiens 0 248
ENST00000489155 PFN2-007 protein_coding Homo_sapiens 0 248
ENST00000490975 PFN2-010 protein_coding Homo_sapiens 2e-33 147
ENST00000497148 PFN2-018 protein_coding Homo_sapiens 0 248
ENST00000498169 PFN2-013 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000498307 PFN2-008 protein_coding Homo_sapiens 0 248

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