C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone 2, H2, like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000055913 hist2h2l-001 ENSDARG00000068996 7955 - 10:30723401-30724224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000055913
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000055913 83.715±21.28 18.879±14.63 4.298±1.09 9.080±0.00 60.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_0001 CGP 10:30723401-30725346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0000790 IDA nuclear chromatin
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117835 Gm12957-001 processed_pseudogene Mus_musculus 0 279
ENST00000356530 HIST1H2BF-001 protein_coding Homo_sapiens 0 329
ENST00000619466 HIST1H2BH-001 protein_coding Homo_sapiens 0 309

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