C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tnf receptor-associated factor 4b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000056878 traf4b-001 ENSDARG00000038964 7955 - 21:37840768-37859617 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000056878
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000056878 0.505±0.38 0.212±0.05 5.006±2.55 0.112±0.00 0.103±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0042981 IEA regulation of apoptotic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017530 Traf4-001 protein_coding Mus_musculus 4.2039e-45 187
ENSMUST00000148218 Traf4-003 retained_intron Mus_musculus 2.99878e-43 180
ENSMUST00000149437 Traf4-002 retained_intron Mus_musculus 5.60519e-45 187

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