C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitination factor E4A (UFD2 homolog, yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000059376 ube4a-002 ENSDARG00000040571 7955 - 15:22777220-22796439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000059376
Transcript ID Brain Heart Liver
ENSDART00000059376 2.328±0.50 1.754±0.00 0.409±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0034450 IEA ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117506 Ube4a-003 protein_coding Mus_musculus 0 490
ENSMUST00000117549 Ube4a-005 protein_coding Mus_musculus 0 944
ENSMUST00000125642 Ube4a-007 protein_coding Mus_musculus 0.000000000006 75
ENSMUST00000138559 Ube4a-002 retained_intron Mus_musculus 0 316
ENSMUST00000145657 Ube4a-001 nonsense_mediated_decay Mus_musculus 0 782
ENSMUST00000154287 Ube4a-004 nonsense_mediated_decay Mus_musculus 0 433

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