C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitination factor E4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117506 Ube4a-003 ENSMUSG00000059890 10090 - 9:44923131-44965560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117506 3.940±1.88 2.892±1.18 1.668±0.00 2.006±0.16 2.246±1.12 1.995±0.89 0.921±0.00 3.136±1.45 3.732±1.68 2.345±0.49 1.055±0.05 1.610±0.57 4.823±1.93 3.616±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000209 IDA protein polyubiquitination
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0034450 IDA ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000059376 ube4a-002 protein_coding Danio_rerio 0 490
ENSDART00000148311 ube4a-001 protein_coding Danio_rerio 0 316
ENST00000252108 UBE4A-001 protein_coding Homo_sapiens 0 3310
ENST00000431736 UBE4A-002 protein_coding Homo_sapiens 0 3214
ENST00000545354 UBE4A-003 protein_coding Homo_sapiens 0 1123

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