C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitination factor E4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117549 Ube4a-005 ENSMUSG00000059890 10090 - 9:44925848-44965600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000117549
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117549 3.040±0.98 2.315±0.39 2.469±0.00 4.430±0.70 3.000±0.61 1.413±0.31 2.484±0.55 2.502±0.85 2.911±1.21 3.857±1.20 6.862±2.61 3.007±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000209 IDA protein polyubiquitination
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005737 IDA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0034450 IDA ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000059376 ube4a-002 protein_coding Danio_rerio 0 944
ENSDART00000148311 ube4a-001 protein_coding Danio_rerio 0 316
ENST00000252108 UBE4A-001 protein_coding Homo_sapiens 0 4348
ENST00000431736 UBE4A-002 protein_coding Homo_sapiens 0 4250
ENST00000545354 UBE4A-003 protein_coding Homo_sapiens 0 2344

Loading