C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY-box containing gene 4b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000063476 sox4b-201 ENSDARG00000043235 7955 + 16:20986-22432 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000063476
Transcript ID Heart Kidney Liver Muscle
ENSDART00000063476 0.365±0.00 1.115±0.00 0.303±0.00 1.878±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MW CIL_0005MW_0001 CGP 16:20986-90312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0031018 IMP endocrine pancreas development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067230 Sox4-001 protein_coding Mus_musculus 0 355
ENST00000244745 SOX4-001 protein_coding Homo_sapiens 0 355
ENST00000322002 SOX11-001 protein_coding Homo_sapiens 0 281
ENST00000342665 SOX12-001 protein_coding Homo_sapiens 0 305

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