C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE, RhoGEF and PH domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000066949 fgd6-001 ENSDARG00000045528 7955 - 4:24949709-24996004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066949
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066949 0.435±0.00 0.697±0.46 0.389±0.20 0.063±0.00 0.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XD CIL_0005XD_0001 CGP 4:24926694-24996004
CIL_0000Y0 CIL_0000Y0_0001 CGP 4:24949709-25034103

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020208 Fgd6-001 protein_coding Mus_musculus 0 422

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