C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005XD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045527-ENSDARG00000045528 CGP 7955 4:24926694-24996004
GeneTranscriptPositionBiotype
ENSDARG00000045527 (nr2c1)
nuclear receptor subfamily 2, group C, member 1 		ENSDART00000066948 (nr2c1-201) 24926699-24945771 protein_coding
ENSDART00000128968 (nr2c1-001) 24926694-24945753 protein_coding
ENSDARG00000045528 (fgd6)
FYVE, RhoGEF and PH domain containing 6 		ENSDART00000066949 (fgd6-001) 24949709-24996004 protein_coding
CIL_0005XD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120798-ENSG00000180263 CGP 9606 12:95020229-95217482
GeneTranscriptPositionBiotype
ENSG00000120798 (NR2C1)
nuclear receptor subfamily 2, group C, member 1 		ENST00000330677 (NR2C1-004) 95030418-95073537 protein_coding
ENST00000333003 (NR2C1-001) 95020229-95073703 protein_coding
ENST00000393101 (NR2C1-002) 95030409-95073580 protein_coding
ENST00000545833 (NR2C1-005) 95028458-95067384 processed_transcript
ENST00000546367 (NR2C1-010) 95058353-95073510 processed_transcript
ENST00000546416 (NR2C1-014) 95022334-95049492 retained_intron
ENST00000547469 (NR2C1-009) 95067337-95073017 protein_coding
ENST00000547594 (NR2C1-013) 95026833-95057757 processed_transcript
ENST00000548252 (NR2C1-012) 95049128-95058393 processed_transcript
ENST00000548966 (NR2C1-007) 95058409-95073545 processed_transcript
ENST00000549482 (NR2C1-008) 95066928-95073503 retained_intron
ENST00000549617 (NR2C1-016) 95021921-95025349 retained_intron
ENST00000551386 (NR2C1-006) 95059920-95073615 processed_transcript
ENST00000551647 (NR2C1-018) 95021893-95040598 protein_coding
ENST00000552417 (NR2C1-011) 95058420-95067370 processed_transcript
ENST00000552484 (NR2C1-015) 95028106-95031394 retained_intron
ENST00000552791 (NR2C1-017) 95030409-95051869 nonsense_mediated_decay
ENST00000552861 (NR2C1-003) 95021893-95073569 retained_intron
ENST00000622476 (NR2C1-201) 95028458-95073628 protein_coding
ENSG00000180263 (FGD6)
FYVE, RhoGEF and PH domain containing 6 		ENST00000343958 (FGD6-001) 95076749-95217464 protein_coding
ENST00000451107 (FGD6-003) 95081398-95217482 nonsense_mediated_decay
ENST00000546711 (FGD6-004) 95085543-95217464 protein_coding
ENST00000548069 (FGD6-006) 95081170-95091787 protein_coding
ENST00000549499 (FGD6-002) 95092828-95217379 protein_coding
ENST00000550368 (FGD6-007) 95189192-95208956 processed_transcript
ENST00000551521 (FGD6-005) 95091707-95116973 protein_coding
ENSG00000237774 (RP11-129B9.1)
 ENST00000470084 (RP11-129B9.1-001) 95125760-95126389 processed_pseudogene
ENSG00000257121 (RP11-129B9.2)
 ENST00000553003 (RP11-129B9.2-001) 95100531-95101045 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XD_0001ENSDARG00000045527ENSDART00000066948ENSDART00000128968ENSDARG00000045528ENSDART00000066949CIL_0005XD_0002ENSG00000120798ENST00000330677ENST00000333003ENST00000393101ENST00000545833ENST00000546367ENST00000546416ENST00000547469ENST00000547594ENST00000548252ENST00000548966ENST00000549482ENST00000549617ENST00000551386ENST00000551647ENST00000552417ENST00000552484ENST00000552791ENST00000552861ENST00000622476ENSG00000180263ENST00000343958ENST00000451107ENST00000546711ENST00000548069ENST00000549499ENST00000550368ENST00000551521ENSG00000237774ENST00000470084ENSG00000257121ENST00000553003
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XD_0001ENSDARG00000045527ENSDART00000066948ENSDART00000128968ENSDARG00000045528ENSDART00000066949CIL_0005XD_0002ENSG00000120798ENST00000330677ENST00000333003ENST00000393101ENST00000545833ENST00000546367ENST00000546416ENST00000548252ENST00000549617ENST00000551386ENST00000551647ENST00000552861ENST00000622476ENSG00000180263ENST00000343958ENST00000451107ENST00000546711ENST00000549499ENSG00000237774ENST00000470084ENSG00000257121ENST00000553003
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045527 ENSDART00000066948 N/A N/A N/A 2.197±0.66 N/A N/A 2.105±0.00 3.621±1.37 0.488±0.00 N/A N/A N/A N/A N/A
ENSDART00000128968 N/A N/A N/A 3.415±2.27 N/A N/A 4.508±1.52 2.217±0.00 N/A N/A 1.881±0.00 N/A N/A N/A
ENSDARG00000045528 ENSDART00000066949 N/A N/A N/A 0.435±0.00 N/A N/A 0.697±0.46 0.389±0.20 0.063±0.00 N/A 0.598±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120798 ENST00000330677 N/A N/A N/A N/A N/A 0.813±0.00 N/A N/A N/A N/A N/A 1.642±0.01 0.674±0.00 N/A
ENST00000333003 0.552±0.00 N/A 0.468±0.00 0.537±0.10 0.978±0.00 0.450±0.00 0.578±0.23 1.068±0.00 0.521±0.00 0.979±0.58 0.322±0.10 1.555±0.87 0.396±0.07 1.541±0.00
ENST00000393101 N/A N/A 0.590±0.00 N/A N/A N/A N/A 1.613±0.00 N/A N/A N/A 2.925±0.68 N/A 2.817±0.41
ENST00000545833 N/A N/A N/A N/A 1.255±0.00 1.440±0.00 N/A N/A N/A N/A N/A N/A 0.706±0.00 N/A
ENST00000546367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.897±0.00 5.830±0.00 17.892±0.00
ENST00000546416 N/A N/A N/A N/A 3.243±0.00 N/A N/A N/A N/A 1.712±0.00 N/A N/A N/A N/A
ENST00000547469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.772±0.00 N/A N/A N/A
ENST00000548966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549617 N/A N/A N/A N/A N/A N/A 1.510±0.00 N/A N/A N/A 3.125±0.00 6.807±1.13 1.417±0.15 7.034±0.00
ENST00000551386 N/A N/A N/A N/A N/A 3.736±0.00 N/A 7.050±0.00 N/A N/A N/A N/A N/A N/A
ENST00000551647 N/A 6.089±0.00 N/A N/A 2.766±0.00 2.158±0.00 N/A 3.671±0.00 2.615±0.00 2.081±0.00 0.970±0.00 4.545±0.00 2.450±0.00 6.806±0.23
ENST00000552417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552861 0.986±0.00 1.852±0.00 N/A 1.310±0.20 0.806±0.26 0.682±0.20 1.722±0.00 1.158±0.29 0.890±0.16 1.585±0.70 0.836±0.26 0.982±0.00 0.691±0.23 1.832±0.29
ENST00000622476 2.248±0.00 N/A 1.278±0.00 1.145±0.00 1.430±0.00 N/A 1.644±0.73 N/A N/A 1.399±0.00 1.282±0.00 N/A 1.423±0.00 2.740±0.00
ENSG00000180263 ENST00000343958 0.399±0.00 0.124±0.00 N/A 0.540±0.13 N/A 0.864±0.14 0.633±0.22 0.366±0.14 0.751±0.55 1.781±0.32 0.256±0.06 0.975±0.72 0.412±0.13 1.025±0.00
ENST00000451107 N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A 0.182±0.00 N/A N/A N/A
ENST00000546711 N/A 0.407±0.00 N/A 0.437±0.17 0.432±0.21 0.722±0.00 0.590±0.00 N/A 1.200±0.00 N/A N/A 2.679±0.00 N/A N/A
ENST00000548069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549499 N/A N/A 1.448±0.00 0.994±0.00 4.443±0.00 2.940±0.00 0.363±0.00 0.909±0.00 N/A 3.003±0.00 N/A 1.240±0.33 N/A 0.903±0.00
ENST00000550368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237774 ENST00000470084 1.526±0.00 1.895±0.00 0.467±0.00 0.074±0.00 1.306±0.00 0.796±0.00 N/A 0.215±0.00 0.123±0.06 0.041±0.00 0.500±0.00 0.122±0.09 N/A 0.346±0.31
ENSG00000257121 ENST00000553003 N/A 0.125±0.00 N/A N/A N/A N/A 0.326±0.00 N/A 0.028±0.00 0.029±0.00 N/A 0.225±0.00 N/A 0.379±0.00

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