C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative breast adenocarcinoma marker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000076103 bc2-001 ENSDARG00000053979 7955 - 12:28598342-28602091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000076103
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000076103 23.011±5.23 37.706±10.65 32.111±5.46 1.982±0.00 7.333±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005711 Chmp2a-201 protein_coding Mus_musculus 0 381
ENSMUST00000160999 Gm8185-001 processed_pseudogene Mus_musculus 0 329
ENST00000312547 CHMP2A-001 protein_coding Homo_sapiens 0 375
ENST00000596708 CHMP2A-007 protein_coding Homo_sapiens 0 309
ENST00000597209 CHMP2A-008 retained_intron Homo_sapiens 2e-23 113
ENST00000600006 CHMP2A-009 protein_coding Homo_sapiens 0 329
ENST00000600118 CHMP2A-003 protein_coding Homo_sapiens 0 375
ENST00000601220 CHMP2A-004 protein_coding Homo_sapiens 0 375

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