C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005711 Chmp2a-201 ENSMUSG00000033916 10090 - 7:13032006-13034777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005711
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005711 55.005±5.42 35.350±1.77 102.251±13.42 103.388±47.67 38.192±2.65 64.012±6.46 39.863±0.76 67.743±6.94 64.170±20.12 57.412±3.61 39.745±1.75 67.774±56.52 176.251±110.19 86.037±80.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z2 CIL_0006Z2_0002 CGP 7:13024152-13034777
CIL_00070T CIL_00070T_0002 CGP 7:13032006-13038275

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005829 IDA cytosol
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019904 IEA protein domain specific binding
GO:0045184 IEA establishment of protein localization
GO:0050792 IEA regulation of viral process
GO:0070062 IEA extracellular vesicular exosome
GO:1902188 IEA positive regulation of viral release from host cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000076103 bc2-001 protein_coding Danio_rerio 0 381
ENSDART00000139255 bc2-005 retained_intron Danio_rerio 0 322
ENST00000312547 CHMP2A-001 protein_coding Homo_sapiens 0 900
ENST00000596708 CHMP2A-007 protein_coding Homo_sapiens 0 660
ENST00000597209 CHMP2A-008 retained_intron Homo_sapiens 5e-29 132
ENST00000600006 CHMP2A-009 protein_coding Homo_sapiens 0 601
ENST00000600118 CHMP2A-003 protein_coding Homo_sapiens 0 902
ENST00000601220 CHMP2A-004 protein_coding Homo_sapiens 0 900

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