C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000079296 rims2a-201 ENSDARG00000019622 7955 - 16:47173373-47484141 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000079296
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000079296 14.182±4.68 0.113±0.06 0.118±0.00 0.022±0.00 0.843±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0017137 IEA Rab GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042917 Rims2-201 protein_coding Mus_musculus 0 322
ENSMUST00000082054 Rims2-202 protein_coding Mus_musculus 0 213
ENST00000395361 RIMS2-012 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000504942 RIMS2-001 protein_coding Homo_sapiens 0 350

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