C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082054 Rims2-202 ENSMUSG00000037386 10090 + 15:39198332-39681940 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082054
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082054 0.128±0.00 0.620±0.16 7.714±6.17 0.044±0.00 0.149±0.04 0.043±0.00 0.084±0.05 0.039±0.03 0.078±0.01 0.007±0.00 0.381±0.15 0.065±0.02 0.779±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060F CIL_00060F_0002 CGP 15:39112865-39681940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0010628 IGI positive regulation of gene expression
GO:0017137 IEA Rab GTPase binding
GO:0017156 IDA calcium ion-dependent exocytosis
GO:0017157 IMP regulation of exocytosis
GO:0019933 IDA cAMP-mediated signaling
GO:0030054 IEA cell junction
GO:0030073 IDA insulin secretion
GO:0042391 IDA regulation of membrane potential
GO:0043005 IEA neuron projection
GO:0044325 IDA ion channel binding
GO:0045202 IEA synapse
GO:0046872 IEA metal ion binding
GO:0048791 IGI calcium ion-dependent exocytosis of neurotransmitter
GO:0097151 IGI positive regulation of inhibitory postsynaptic membrane potential
GO:2000463 IGI positive regulation of excitatory postsynaptic membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121434 protein_coding Danio_rerio 0 215
ENSDART00000079296 rims2a-201 protein_coding Danio_rerio 0 213
ENST00000262231 RIMS2-004 protein_coding Homo_sapiens 0 3066
ENST00000339750 RIMS2-201 protein_coding Homo_sapiens 0 1074
ENST00000395361 RIMS2-012 processed_transcript Homo_sapiens 0 420
ENST00000406091 RIMS2-202 protein_coding Homo_sapiens 0 1279
ENST00000408894 RIMS2-006 protein_coding Homo_sapiens 0 1668
ENST00000436393 RIMS2-007 protein_coding Homo_sapiens 0 1279
ENST00000501515 RIMS2-011 processed_transcript Homo_sapiens 0 372
ENST00000504942 RIMS2-001 protein_coding Homo_sapiens 0 1733
ENST00000507677 RIMS2-008 retained_intron Homo_sapiens 0 1463
ENST00000507740 RIMS2-005 protein_coding Homo_sapiens 0 1668
ENST00000511046 RIMS2-009 retained_intron Homo_sapiens 0 521
ENST00000512598 RIMS2-010 retained_intron Homo_sapiens 0 372
ENST00000515551 RIMS2-003 protein_coding Homo_sapiens 0 1230
ENST00000523362 RIMS2-013 protein_coding Homo_sapiens 0 787

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