C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042917 Rims2-201 ENSMUSG00000037386 10090 + 15:39198363-39681764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000042917
Transcript ID Adrenal Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042917 0.387±0.02 12.220±8.31 0.105±0.00 0.024±0.01 0.030±0.01 0.057±0.00 0.004±0.00 0.144±0.01 0.067±0.05 0.692±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060F CIL_00060F_0002 CGP 15:39112865-39681940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0017137 IEA Rab GTPase binding
GO:0017156 IDA calcium ion-dependent exocytosis
GO:0017157 IMP regulation of exocytosis
GO:0019904 IEA protein domain specific binding
GO:0019933 IDA cAMP-mediated signaling
GO:0030073 IDA insulin secretion
GO:0042391 IDA regulation of membrane potential
GO:0043234 IEA protein complex
GO:0044325 IDA ion channel binding
GO:0045202 IEA synapse
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity
GO:0048791 IGI calcium ion-dependent exocytosis of neurotransmitter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079296 rims2a-201 protein_coding Danio_rerio 0 322
ENSDART00000121434 protein_coding Danio_rerio 0 311
ENST00000262231 RIMS2-004 protein_coding Homo_sapiens 0 3064
ENST00000339750 RIMS2-201 protein_coding Homo_sapiens 0 920
ENST00000395361 RIMS2-012 processed_transcript Homo_sapiens 0 420
ENST00000406091 RIMS2-202 protein_coding Homo_sapiens 0 1254
ENST00000408894 RIMS2-006 protein_coding Homo_sapiens 0 2242
ENST00000436393 RIMS2-007 protein_coding Homo_sapiens 0 1254
ENST00000501515 RIMS2-011 processed_transcript Homo_sapiens 0 372
ENST00000504942 RIMS2-001 protein_coding Homo_sapiens 0 1991
ENST00000507677 RIMS2-008 retained_intron Homo_sapiens 0 1463
ENST00000507740 RIMS2-005 protein_coding Homo_sapiens 0 2242
ENST00000511046 RIMS2-009 retained_intron Homo_sapiens 0 521
ENST00000512598 RIMS2-010 retained_intron Homo_sapiens 0 372
ENST00000515551 RIMS2-003 protein_coding Homo_sapiens 0 1230
ENST00000523362 RIMS2-013 protein_coding Homo_sapiens 0 787

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