C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box D9a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000082354 hoxd9a-001 ENSDARG00000059274 7955 - 9:1954804-1956526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000082354
Transcript ID Heart Kidney Liver Muscle
ENSDART00000082354 0.321±0.12 0.589±0.12 0.041±0.00 2.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0004 UCNEbase 9:1732069-2355236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048026 Hoxa11-001 protein_coding Mus_musculus 0.00004 55
ENSMUST00000131495 Hoxa11-002 processed_transcript Mus_musculus 0.00004 55

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