C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox A11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131495 Hoxa11-002 ENSMUSG00000038210 10090 - 6:52242110-52245795 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000131495
Transcript ID Adipose Bladder Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000131495 13.300±8.82 10.565±0.85 0.840±0.14 0.014±0.01 2.411±0.23 0.514±0.20 1.351±0.70 0.063±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P7 CIL_0003P7_0002 CGP 6:52231197-52245810
CIL_0003P8 CIL_0003P8_0002 CGP 6:52242106-52260880

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082354 hoxd9a-001 protein_coding Danio_rerio 0.00004 55
ENST00000006015 HOXA11-001 protein_coding Homo_sapiens 0 1469
ENST00000517402 HOXA11-002 protein_coding Homo_sapiens 0 1587

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