C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lipin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000085242 lipin2-201 ENSDARG00000061214 7955 + 2:30683870-30699339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000085242
Transcript ID Brain Kidney Muscle
ENSDART00000085242 5.599±1.58 5.029±2.09 0.526±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000157 CIL_000157_0001 CGP 2:30631020-30699340
CIL_000158 CIL_000158_0001 CGP 2:30675183-30732894

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IEA transcription coactivator activity
GO:0006629 IEA lipid metabolic process
GO:0008195 IEA phosphatidate phosphatase activity
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053173 Lpin2-014 retained_intron Mus_musculus 1e-35 154
ENSMUST00000126681 Lpin2-005 protein_coding Mus_musculus 0 359
ENSMUST00000129635 Lpin2-001 protein_coding Mus_musculus 0 359
ENSMUST00000133156 Lpin2-011 retained_intron Mus_musculus 0 220
ENSMUST00000154507 Lpin2-010 nonsense_mediated_decay Mus_musculus 0 311
ENSMUST00000156565 Lpin2-006 retained_intron Mus_musculus 5e-35 154

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