C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129635 Lpin2-001 ENSMUSG00000024052 10090 + 17:71183978-71249817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129635
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129635 1.838±0.77 6.150±0.00 6.184±2.52 3.091±0.00 0.732±0.26 3.598±2.51 10.997±7.34 4.481±0.03 0.422±0.11 7.312±2.93 5.303±1.55 3.713±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000157 CIL_000157_0002 CGP 17:71019521-71249817
CIL_000158 CIL_000158_0002 CGP 17:71182560-71310965

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0005634 IEA nucleus
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006629 IDA lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0008195 IDA phosphatidate phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085242 lipin2-201 protein_coding Danio_rerio 0 359
ENSDART00000141575 lipin2-001 protein_coding Danio_rerio 0 359
ENST00000261596 LPIN2-001 protein_coding Homo_sapiens 0 2966
ENST00000584294 LPIN2-002 protein_coding Homo_sapiens 0 785
ENST00000584915 LPIN2-003 protein_coding Homo_sapiens 0 339

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