C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126681 Lpin2-005 ENSMUSG00000024052 10090 + 17:71204676-71248242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungMuscleOvaryENSMUST00000126681
Transcript ID Adrenal Breast Colon Liver Lung Muscle Ovary
ENSMUST00000126681 1.862±0.00 1.543±0.00 2.373±0.63 2.556±0.56 6.902±0.66 0.104±0.00 3.337±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000157 CIL_000157_0002 CGP 17:71019521-71249817
CIL_000158 CIL_000158_0002 CGP 17:71182560-71310965

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IEA:IDA transcription coactivator activity
GO:0005634 IEA nucleus
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006629 IEA:IDA lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0008195 IEA:IDA phosphatidate phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0045944 IEA:IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085242 lipin2-201 protein_coding Danio_rerio 0 359
ENSDART00000141575 lipin2-001 protein_coding Danio_rerio 0 359
ENST00000261596 LPIN2-001 protein_coding Homo_sapiens 0 2974
ENST00000584294 LPIN2-002 protein_coding Homo_sapiens 0 787
ENST00000584915 LPIN2-003 protein_coding Homo_sapiens 0 409

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